...
mkdir Pool1 Pool2 Pool3 Pool4
mv parsed_Trout1*_Pool1* ./Pool1
mv parsed_Trout1*_Pool2* ./Pool2
mv parsed_Trout1*_Pool3* ./Pool3
mv parsed_Trout1*_Pool4* ./Pool4
/project/gtl/seq/raw/trout1/Trout1_1/demultiplex/run_splitFastq_gbs.sh
...
...
mkdir Pool1 Pool2 Pool3 Pool4
mv parsed_Trout1*_Pool1* ./Pool1
mv parsed_Trout1*_Pool2* ./Pool2
mv parsed_Trout1*_Pool3* ./Pool3
mv parsed_Trout1*_Pool4* ./Pool4
/project/gtl/seq/raw/trout1/Trout1_1/demultiplex/run_splitFastq_gbs.sh
...