...
NS6_Demux.csv is used to map MIDS to sample names and projects.
Stopped at above step on 2/01/23 1:41pm
Splitting to fastq for individuals
...
splitFastq.pl and splitFastq_manyInputfiles.pl will need tweaking in the future, whenever sample names and the format of the key for demultiplexing and metadata changes. The number of columns has differed among some of early sequence lanes, which necessitated changes to this parsing script.
Stopped at above step on 2/01/23 6:05pm
Calculate summary statistics on reads
...