changes.mady.by.user Alex Buerkle
Saved on Sept 28, 2020
Saved on Oct 02, 2020
Status (
1 October 2020)
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Based on Gordon Custer and Joshua Harrison's work to understand why chimeras were not being found and screened out, Alex Buerkle made the suggested change in a setting in vsearch. Started rerunning all otutable generation. Should be complete on 2 October. Should result in ~2% fewer OTUs.
vsearch
(23 September 2020) A first pass through the bioinformatics for this library is complete and otutables are available for review (Paul Ayayee Erin Bentley John Calder Joshua HarrisonSeifeddine Ben Tekaya). Alex Buerkle used the same bioinformatic steps as were used for runs 1A and 1B.