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This was the page for a first attempt at making this library and is superseded by its parent page.

Quantify DNAs on Synergy HTX Plate Reader:

View file
nameGompert_USU_initialDNA.xlsx
View file
nameKG1RedoAndKG3Norm.xlsx

Normalize DNAs on Nimbus:

Had to define these semi skirted plates for the Nimbus. We might want to standardize to full skirted plates. They are less variable.

16S Library Prep:

Swap out KG4 G9’s blank for Mock Community positive control

...

Temp C

Cycles

Time

95*

1X

3:00

98

19X

0:30

55*

19X

0:30

72

19X

0:30

72

1X

5:00

4

1X

0:00

Purify samples using GSAF’s second modified MagBead protocol:

Equilibrate Beads to room Temperature

...

____________________________________________________________________________________________________________

ITS Library Prep:

Swap out KG4 G9’s blank for Mock Community positive control

...

Temp C

Cycles

Time

95*

1X

3:00

98

19X

0:30

55*

19X

0:30

72

19X

0:30

72

1X

5:00

4

1X

0:00

Purify samples using GSAF’s second modified MagBead protocol:

Equilibrate Beads to room Temperature

...