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unpigz --to-stdout /project/microbiome/data_queue/seq/TRNL1/rawdata/TRNL1_R1.fastq | split -l 10000000 -d --suffix-length=3 --additional-suffix=.fastq - TRNL1_R1_ ;
unpigz --to-stdout /project/microbiome/data_queue/seq/TRNL1/rawdata/TRNL1_R2.fastq | split -l 10000000 -d --suffix-length=3 --additional-suffix=.fastq - TRNL1_R2_

/project/microbiome/data_queue/seq/TRNL1/rawdata/run_parse_count_onSplitInput.pl

cd /project/microbiome/data_queue/seq/TRNL1/rawdata

./run_splitFastq_fwd.sh

./run_splitFastq_rev.sh

./run_aggregate.sh

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